CNFN

Across TCGA cell cohorts, CNFN RNA expression is significantly associated with the RNA expression of many other genes, with 7,148 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible CNFN-associated genes across cancer lineages are CA11, DHDH, and KLC3. Each is linked with CNFN in more than 10 cancer types. Because this analysis shows association rather than direction, both CNFN-to-partner and partner-to-CNFN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNFN versus CA11 in PANCREAS, with a Pearson correlation of 0.59.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNFN→partner) and Y-score (partner→CNFN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PANCREAS	CA11 →	+2.129	+1.079	<.001	<.001	3	11
OVARY	DHDH →	+0.967	+1.618	<.001	<.001	3	7
STOMACH	KLC3 →	+2.530	+1.361	<.001	.002	3	7
OVARY	HPCAL4 →	+0.918	+1.849	.002	<.001	3	6
BREAST	HID1 →	+2.552	+1.072	.001	.001	2	7
STOMACH	EID2 →	+1.134	+2.085	.003	<.001	2	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,148 associations by consensus.

CNFN vs CA11 — PANCREAS

Explore this scatter interactively →