CNEP1R1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CNEP1R1 protein abundance is significantly associated with the RNA expression of many other genes, with 4,063 significant associations in total. OV shows the largest number of these associations.

The most reproducible CNEP1R1-associated genes across cancer lineages are CNNM1, PPP1R1B, and GSTM4. Each is linked with CNEP1R1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CNEP1R1-to-partner and partner-to-CNEP1R1 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNEP1R1→partner) and Y-score (partner→CNEP1R1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCNNM1 →-1.130-0.591<.001.00632
OVPPP1R1B →-1.993-0.653<.001<.00132
HNSCGSTM4 →-0.899-0.576<.001.00732
HNSCCRPPA →-0.812-0.509<.001<.00132
UCECAP5S1 →-0.347-0.333.007.00632
UCECRSPH9 →-0.554-0.410.002.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,063 associations by consensus.

Exploration