CMTM7

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CMTM7 protein abundance is significantly associated with the RNA expression of many other genes, with 2,146 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CMTM7-associated genes across cancer lineages are CMTM6, MIR4458HG, and FJX1. Each is linked with CMTM7 in more than 2 cancer types. Because this analysis shows association rather than direction, both CMTM7-to-partner and partner-to-CMTM7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CMTM7 versus CMTM6 in BRCA, with a Pearson correlation of 0.90.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CMTM7→partner) and Y-score (partner→CMTM7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACMTM6 →+1.111+0.805.001.00133
COADMIR4458HG →-1.250-0.460.002.00232
UCECFJX1 →+0.748+0.493.001.00532
PDACKLF3 →-0.387-0.497.003.00432
LSCCCILK1 →-0.965-0.325<.001.00732
LSCCBRD8 →-0.460-0.306<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,146 associations by consensus.

CMTM7 vs CMTM6 — BRCA

Per-sample scatter of CMTM7 vs CMTM6 in BRCA (Pearson r = 0.90).

Explore this scatter interactively →

Exploration