CMTM5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CMTM5 protein abundance is significantly associated with the RNA expression of many other genes, with 1,688 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CMTM5-associated genes across cancer lineages are CCL17, NIPAL2, and NCALD. Each is linked with CMTM5 in more than 1 cancer types. Because this analysis shows association rather than direction, both CMTM5-to-partner and partner-to-CMTM5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CMTM5 versus CCL17 in OV, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CMTM5→partner) and Y-score (partner→CMTM5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCCL17 →+2.197+1.166.002.00631
OVNIPAL2 →+1.118+0.870.006.00731
OVNCALD →+1.061+0.931.005.00331
OVSQLE →+1.564+1.426.002.00131
OVC19orf53 →-0.875-1.078.004.00831
OVRPL18A →-0.958-1.128.003.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,688 associations by consensus.

CMTM5 vs CCL17 — OV

Per-sample scatter of CMTM5 vs CCL17 in OV (Pearson r = 0.38).

Explore this scatter interactively →

Exploration