CLVS1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CLVS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,711 significant associations in total. BONE shows the largest number of these associations.

The most reproducible CLVS1-associated GO terms across cancer lineages are Positive regulation of intracellular sterol transport, Positive regulation of intracellular cholesterol transport, and Response to arachidonate. Each is linked with CLVS1 in more than 5 cancer types. Because this analysis shows association rather than direction, both CLVS1-to-partner and partner-to-CLVS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of intracellular sterol transport grouped by CLVS1-low versus CLVS1-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CLVS1→partner) and Y-score (partner→CLVS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSPositive regulation of intracellular sterol transport →+0.082+0.118.002.00236
OESOPHAGUSPositive regulation of intracellular cholesterol transport →+0.082+0.118.002.00236
BONEResponse to arachidonate →-0.187-0.152.001.00235
BONEPositive regulation of potassium ion import across plasma membrane →+0.147+0.139.008.00925
PANCREASCell cycle DNA replication initiation →-0.160-0.176<.001.00225
PANCREASNuclear cell cycle DNA replication initiation →-0.160-0.176<.001.00225
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,711 associations by consensus.

Positive regulation of intracellular sterol transport by CLVS1 expression — OESOPHAGUS

Box plot of Positive regulation of intracellular sterol transport in CLVS1-low vs CLVS1-high samples in OESOPHAGUS.

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