CLU

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CLU protein abundance is significantly associated with the RNA expression of many other genes, with 13,286 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CLU-associated genes across cancer lineages are PRELP, CCN2, and IGFBP7. Each is linked with CLU in more than 5 cancer types. Because this analysis shows association rather than direction, both CLU-to-partner and partner-to-CLU results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CLU versus PRELP in COAD, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CLU→partner) and Y-score (partner→CLU) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADPRELP →+1.308+0.616<.001<.00136
COADCCN2 →+1.295+0.789<.001<.00136
GBMIGFBP7 →+0.829+0.562<.001.00135
CCRCCLINC00702 →+0.579+0.790<.001<.00135
GBMSLC16A10 →+1.206+0.726<.001<.00134
COADSNAI1 →+0.884+0.598<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,286 associations by consensus.

CLU vs PRELP — COAD

Per-sample scatter of CLU vs PRELP in COAD (Pearson r = 0.38).

Explore this scatter interactively →

Exploration