CLSPN

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CLSPN mutation is significantly associated with the total protein of many other genes, with 51 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CLSPN-associated genes across cancer lineages are eEF2, eIF4E, and Fibronectin. Each is linked with CLSPN in more than 1 cancer types. Because this analysis shows association rather than direction, both CLSPN-to-partner and partner-to-CLSPN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by CLSPN-low versus CLSPN-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CLSPN→partner) and Y-score (partner→CLSPN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.244+1.906.016.01432
UCECeIF4E →+0.208+2.237<.001<.00132
UCECFibronectin →-0.238-1.653.011.01032
UCECGAPDH →+0.309+1.678.042.01932
UCECmTOR_pS2448 →-0.105-1.349.013.03132
UCECPCNA →+0.150+1.398.014.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 51 associations by consensus.

eEF2 by CLSPN expression — UCEC

Box plot of eEF2 in CLSPN-low vs CLSPN-high samples in UCEC.

Explore this box plot interactively →

Exploration