CLPTM1

RNA expression — cross-omics
Cross-omicsRNA → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CLPTM1 RNA expression is significantly associated with the RNA expression of many other genes, with 10,377 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible CLPTM1-associated genes across cancer lineages are OPA3, GSK3A, and SCAF1. Each is linked with CLPTM1 in more than 19 cancer types. Because this analysis shows association rather than direction, both CLPTM1-to-partner and partner-to-CLPTM1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CLPTM1 versus OPA3 in OVARY, with a Pearson correlation of 0.59.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CLPTM1→partner) and Y-score (partner→CLPTM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYOPA3 →+1.073+0.840<.001<.001320
PANCREASGSK3A →+1.022+0.819<.001<.001219
STOMACHSCAF1 →+1.037+0.962<.001<.001318
STOMACHCCDC97 →+1.202+1.323<.001<.001318
STOMACHFKRP →+1.485+0.953<.001<.001318
KIDNEYBLOC1S3 →+0.885+0.959<.001<.001318
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,377 associations by consensus.

CLPTM1 vs OPA3 — OVARY

Per-sample scatter of CLPTM1 vs OPA3 in OVARY (Pearson r = 0.59).

Explore this scatter interactively →

Exploration