CLHC1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CLHC1 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,324 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CLHC1-associated proteins across cancer lineages are GATAD2B, HDGFL3, and MYEF2. Each is linked with CLHC1 in more than 4 cancer types. Because this analysis shows association rather than direction, both CLHC1-to-partner and partner-to-CLHC1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CLHC1 versus GATAD2B in LSCC, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CLHC1→partner) and Y-score (partner→CLHC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCGATAD2B →+0.306+0.534<.001<.00135
BRCAHDGFL3 →+0.690+0.563.001.00235
LSCCMYEF2 →+0.777+0.391<.001.00535
GBMVEZF1 →+0.495+0.710<.001<.00135
HNSCRCOR3 →+0.390+0.789<.001<.00134
GBMBPTF →+0.293+0.605<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,324 associations by consensus.

CLHC1 vs GATAD2B — LSCC

Per-sample scatter of CLHC1 vs GATAD2B in LSCC (Pearson r = 0.40).

Explore this scatter interactively →

Exploration