CLEC1A

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CLEC1A RNA expression is significantly associated with the go_rna of many other GO terms, with 1,016 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible CLEC1A-associated GO terms across cancer lineages are Regulation of RNA splicing, Proteasomal ubiquitin-independent protein catabolic process, and Energy derivation by oxidation of organic compounds. Each is linked with CLEC1A in more than 5 cancer types. Because this analysis shows association rather than direction, both CLEC1A-to-partner and partner-to-CLEC1A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of RNA splicing grouped by CLEC1A-low versus CLEC1A-high in CNS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CLEC1A→partner) and Y-score (partner→CLEC1A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSRegulation of RNA splicing →+0.035+0.462<.001<.00136
BREASTProteasomal ubiquitin-independent protein catabolic process →+0.089+0.127<.001.00135
CNSEnergy derivation by oxidation of organic compounds →+0.050+0.567<.001<.00134
BREASTmRNA transport →+0.071+0.106.003.00334
LARGE_INTESTINENegative regulation of respiratory burst involved in inflammatory response →+0.047+0.042.006.00934
LARGE_INTESTINENegative regulation of respiratory burst →+0.047+0.042.006.00934
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,016 associations by consensus.

Regulation of RNA splicing by CLEC1A expression — CNS

Box plot of Regulation of RNA splicing in CLEC1A-low vs CLEC1A-high samples in CNS.

Explore this box plot interactively →

Exploration