Across TCGA cell cohorts, CKMT1A protein abundance is significantly associated with the RNA expression of many other genes, with 2,961 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible CKMT1A-associated genes across cancer lineages are CKMT1B, FRAT2, and GFPT2. Each is linked with CKMT1A in more than 9 cancer types. Because this analysis shows association rather than direction, both CKMT1A-to-partner and partner-to-CKMT1A results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CKMT1A→partner) and Y-score (partner→CKMT1A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKIN	CKMT1B →	+2.604	+2.485	<.001	<.001	3	10
BREAST	FRAT2 →	+1.228	+2.923	.002	<.001	3	7
BREAST	GFPT2 →	-2.179	-2.413	<.001	<.001	3	6
SKIN	P3H1 →	-1.621	-2.869	.001	.006	3	6
BREAST	F12 →	+1.297	+1.802	.002	.001	3	5
BREAST	ZNF699 →	-1.142	-2.604	.007	.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,961 associations by consensus.

Exploration

CKMT1A survival (RNA) · tumor vs normal (RNA) · all CKMT1A data types