CHUK

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHUK mutation is significantly associated with the RNA expression of many other genes, with 2,347 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CHUK-associated genes across cancer lineages are MIR4445, MIR6853, and RN7SL248P. Each is linked with CHUK in more than 2 cancer types. Because this analysis shows association rather than direction, both CHUK-to-partner and partner-to-CHUK results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHUK→partner) and Y-score (partner→CHUK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR4445 →+0.123+3.893<.001.00633
BRCAMIR6853 →+0.364+9.057<.001.00332
UCECRN7SL248P →+0.046+2.783<.001.00932
LIHCRPL22P18 →+0.405+4.690<.001.00332
CESCMIR4510 →+0.300+5.342<.001.00232
COADRNU6-1020P →+0.399+3.212<.001.00732
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,347 associations by consensus.

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