CHST6

Across TCGA patient cohorts, CHST6 protein abundance is significantly associated with the RNA expression of many other genes, with 3,940 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CHST6-associated genes across cancer lineages are NWD1, RSPH4A, and FOXJ1. Each is linked with CHST6 in more than 3 cancer types. Because this analysis shows association rather than direction, both CHST6-to-partner and partner-to-CHST6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHST6 versus NWD1 in GBM, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHST6→partner) and Y-score (partner→CHST6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	NWD1 →	+1.412	+0.925	<.001	<.001	3	4
UCEC	RSPH4A →	+1.234	+1.030	.005	<.001	3	3
LSCC	FOXJ1 →	+2.281	+1.150	.004	.002	3	3
LSCC	TTC29 →	+1.188	+1.075	.001	.001	3	3
UCEC	PLEKHS1 →	+1.744	+1.075	<.001	<.001	3	3
GBM	TPPP3 →	+2.022	+0.871	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,940 associations by consensus.

CHST6 vs NWD1 — GBM

Explore this scatter interactively →