CHST12

Across TCGA patient cohorts, CHST12 protein abundance is significantly associated with the RNA expression of many other genes, with 4,155 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CHST12-associated genes across cancer lineages are CASS4, WDR75, and WDR77. Each is linked with CHST12 in more than 2 cancer types. Because this analysis shows association rather than direction, both CHST12-to-partner and partner-to-CHST12 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHST12 versus CASS4 in HNSC, with a Pearson correlation of 0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHST12→partner) and Y-score (partner→CHST12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	CASS4 →	+0.564	+0.359	.007	<.001	3	3
UCEC	WDR75 →	-1.044	-0.434	<.001	.001	3	3
UCEC	WDR77 →	-1.282	-0.663	<.001	<.001	3	3
UCEC	LEO1 →	-0.947	-0.437	.007	.004	3	3
BRCA	SNRNP40 →	-0.586	-0.424	<.001	.005	3	3
UCEC	BAZ1A →	-0.525	-0.453	<.001	.003	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,155 associations by consensus.

CHST12 vs CASS4 — HNSC

Explore this scatter interactively →