CHGB

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CHGB RNA expression is significantly associated with the go_rna of many other GO terms, with 2,026 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible CHGB-associated GO terms across cancer lineages are Regulation of myoblast fusion, Establishment of protein localization to organelle, and Mitochondrial electron transport, cytochrome c to oxygen. Each is linked with CHGB in more than 12 cancer types. Because this analysis shows association rather than direction, both CHGB-to-partner and partner-to-CHGB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of myoblast fusion grouped by CHGB-low versus CHGB-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CHGB→partner) and Y-score (partner→CHGB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCRegulation of myoblast fusion →+0.103+2.773.002.002213
OESOPHAGUSEstablishment of protein localization to organelle →+0.062+0.839<.001.004311
LUNG_NSCLC_LUSCMitochondrial electron transport, cytochrome c to oxygen →+0.071+2.578.001.005311
SKINOxidative phosphorylation →+0.055+0.771<.001<.001310
BLOOD_LymphomaNegative regulation of myoblast fusion →+0.092+0.895<.001.008210
LUNG_SCLCRegulation of syncytium formation by plasma membrane fusion →+0.112+2.792.001.001210
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,026 associations by consensus.

Regulation of myoblast fusion by CHGB expression — LUNG_SCLC

Box plot of Regulation of myoblast fusion in CHGB-low vs CHGB-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration