CHD5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHD5 protein abundance is significantly associated with the protein abundance of many other proteins, with 6,695 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CHD5-associated proteins across cancer lineages are ACIN1_S815, ATG2B, and BACE1. Each is linked with CHD5 in more than 1 cancer types. Because this analysis shows association rather than direction, both CHD5-to-partner and partner-to-CHD5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHD5 versus ACIN1_S815 in GBM, with a Pearson correlation of -0.52.

protein abundance associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CHD5→partner) and Y-score (partner→CHD5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMACIN1_S815 →-0.649-0.452.002.00331
GBMATG2B →+0.281+0.636<.001.00231
GBMBACE1 →+0.610+0.553<.001<.00131
GBMBOD1L1_S3019 →-0.429-0.481.001.00131
GBMBRCA2 →+0.571+0.679.001<.00131
GBMBRSK1_S587 →+0.576+0.602<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,695 associations by consensus.

CHD5 vs ACIN1_S815 — GBM

Per-sample scatter of CHD5 vs ACIN1_S815 in GBM (Pearson r = -0.52).

Explore this scatter interactively →

Exploration