CHASERR

Across TCGA patient cohorts, CHASERR RNA expression is significantly associated with the protein abundance of many other proteins, with 14,553 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CHASERR-associated proteins across cancer lineages are PPIF, MYSM1, and NFIX. Each is linked with CHASERR in more than 4 cancer types. Because this analysis shows association rather than direction, both CHASERR-to-partner and partner-to-CHASERR results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHASERR versus PPIF in LSCC, with a Pearson correlation of -0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CHASERR→partner) and Y-score (partner→CHASERR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	PPIF →	-0.509	-0.797	<.001	<.001	3	5
OV	MYSM1 →	+1.045	+0.916	.002	.001	3	4
OV	NFIX →	+0.890	+0.726	<.001	.005	3	4
HNSC	ZNF24 →	+0.283	+0.707	<.001	.009	3	4
GBM	RPL7 →	-0.433	-0.478	<.001	<.001	3	4
GBM	SIN3A →	+0.239	+0.568	.006	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,553 associations by consensus.

CHASERR vs PPIF — LSCC

Explore this scatter interactively →