CHADL

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHADL mutation is significantly associated with the RNA expression of many other genes, with 2,505 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CHADL-associated genes across cancer lineages are RAB11A, CORO1C, and TTC19. Each is linked with CHADL in more than 1 cancer types. Because this analysis shows association rather than direction, both CHADL-to-partner and partner-to-CHADL results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RAB11A grouped by CHADL-low versus CHADL-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHADL→partner) and Y-score (partner→CHADL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRAB11A →+0.502+2.700.002.00632
UCECCORO1C →+0.808+3.807<.001<.00132
UCECTTC19 →+0.500+3.807.006<.00132
UCECPPP2CA →+0.402+2.754.005.00332
UCECPLCD4 →+0.525+3.512<.001.00232
UCECCAPZA1 →+0.481+3.850.007<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,505 associations by consensus.

RAB11A by CHADL expression — UCEC

Box plot of RAB11A in CHADL-low vs CHADL-high samples in UCEC.

Explore this box plot interactively →

Exploration