Across TCGA patient cohorts, CFAP299 mutation is significantly associated with the RNA expression of many other genes, with 1,390 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CFAP299-associated genes across cancer lineages are ZNF674, RANBP9, and KCTD9. Each is linked with CFAP299 in more than 1 cancer types. Because this analysis shows association rather than direction, both CFAP299-to-partner and partner-to-CFAP299 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CFAP299→partner) and Y-score (partner→CFAP299) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	ZNF674 →	+0.342	+3.384	.004	.004	3	2
SKCM	RANBP9 →	+0.521	+2.019	.005	.005	3	2
SKCM	KCTD9 →	+0.629	+2.547	.005	.001	3	2
SKCM	GAR1 →	+0.386	+3.176	.004	<.001	3	2
SKCM	HBS1L →	+0.517	+3.189	.005	<.001	3	2
SKCM	CTNNAL1 →	+0.745	+3.207	.009	.009	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,390 associations by consensus.

Exploration

CFAP299 survival (RNA) · tumor vs normal (RNA) · all CFAP299 data types