Across TCGA cell cohorts, CFAP299 RNA expression is significantly associated with the RNA expression of many other genes, with 5,429 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible CFAP299-associated genes across cancer lineages are FGF5, ANTXR2, and PRDM8. Each is linked with CFAP299 in more than 13 cancer types. Because this analysis shows association rather than direction, both CFAP299-to-partner and partner-to-CFAP299 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CFAP299→partner) and Y-score (partner→CFAP299) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
URINARY_TRACT	FGF5 →	+3.233	+0.741	<.001	<.001	3	14
SOFT_TISSUE	ANTXR2 →	+3.040	+0.567	<.001	<.001	3	7
LUNG_SCLC	PRDM8 →	+2.112	+1.006	.001	.003	2	8
BONE	RGMB →	+1.765	+0.873	.003	.001	3	6
BONE	RFTN1 →	+3.118	+0.766	<.001	<.001	3	6
LIVER	ITGB1 →	+1.699	+1.082	.001	.004	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,429 associations by consensus.

Exploration

CFAP299 survival (RNA) · tumor vs normal (RNA) · all CFAP299 data types