CERS3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CERS3 mutation is significantly associated with the RNA expression of many other genes, with 1,416 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CERS3-associated genes across cancer lineages are RPL12P20, IGHD5-12, and TRAJ54. Each is linked with CERS3 in more than 2 cancer types. Because this analysis shows association rather than direction, both CERS3-to-partner and partner-to-CERS3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RPL12P20 grouped by CERS3-low versus CERS3-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CERS3→partner) and Y-score (partner→CERS3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRPL12P20 →+0.163+5.069<.001.00833
UCECIGHD5-12 →+0.294+2.664<.001.00433
READTRAJ54 →+0.748+4.054<.001.00432
READRPS14P7 →+0.109+4.341<.001.00732
SKCMTMEM269 →+0.238+2.972<.001<.00132
UCECTRAJ36 →+0.390+1.851<.001.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,416 associations by consensus.

RPL12P20 by CERS3 expression — HNSC

Box plot of RPL12P20 in CERS3-low vs CERS3-high samples in HNSC.

Explore this box plot interactively →

Exploration