CERNA1

Across TCGA patient cohorts, CERNA1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,681 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CERNA1-associated proteins across cancer lineages are MYO5C, TJP1, and HDGFL3. Each is linked with CERNA1 in more than 6 cancer types. Because this analysis shows association rather than direction, both CERNA1-to-partner and partner-to-CERNA1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CERNA1 versus MYO5C in GBM, with a Pearson correlation of 0.54.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CERNA1→partner) and Y-score (partner→CERNA1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	MYO5C →	+0.794	+0.487	<.001	.003	3	7
CCRCC	TJP1 →	+0.307	+0.273	<.001	<.001	3	5
GBM	HDGFL3 →	+0.537	+0.524	<.001	<.001	2	6
LSCC	ANP32A →	+0.310	+0.451	.002	<.001	3	5
HNSC	NDRG1 →	-0.567	-0.369	.001	.001	3	4
HNSC	PPP1R9A_S840 →	+1.395	+0.349	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,681 associations by consensus.

CERNA1 vs MYO5C — GBM

Explore this scatter interactively →