CENPB

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CENPB RNA expression is significantly associated with the protein abundance of many other proteins, with 9,690 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible CENPB-associated proteins across cancer lineages are PTPRA, TRMT61A, and PCNA. Each is linked with CENPB in more than 4 cancer types. Because this analysis shows association rather than direction, both CENPB-to-partner and partner-to-CENPB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CENPB versus PTPRA in GBM, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CENPB→partner) and Y-score (partner→CENPB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPTPRA →+0.495+0.403<.001<.00135
LSCCTRMT61A →+0.340+0.422<.001.00435
LSCCPCNA →+0.433+0.413.001.00135
OVPRNP →+0.566+0.641.001.00234
OVDSTN →+0.577+0.648<.001.00334
COADMAVS →+0.339+0.485.002.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,690 associations by consensus.

CENPB vs PTPRA — GBM

Per-sample scatter of CENPB vs PTPRA in GBM (Pearson r = 0.39).

Explore this scatter interactively →

Exploration