CDS2

Across TCGA patient cohorts, CDS2 mutation is significantly associated with the total protein of many other genes, with 23 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDS2-associated genes across cancer lineages are ATM, Cyclin-B1, and EGFR_pY1068. Each is linked with CDS2 in more than 1 cancer types. Because this analysis shows association rather than direction, both CDS2-to-partner and partner-to-CDS2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by CDS2-low versus CDS2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDS2→partner) and Y-score (partner→CDS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	ATM →	-0.395	-2.807	.046	.003	3	2
UCEC	Cyclin-B1 →	+0.546	+2.807	.026	.003	3	2
UCEC	EGFR_pY1068 →	-0.278	-3.906	.011	<.001	3	1
UCEC	A-Raf_pS299 →	-0.130	-2.459	.013	.019	3	1
UCEC	ERK2 →	+0.213	+2.807	.011	.003	3	1
UCEC	IGFBP2 →	-0.735	-2.115	.009	.019	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 23 associations by consensus.

ATM by CDS2 expression — UCEC

Explore this box plot interactively →