CDS1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDS1 protein abundance is significantly associated with the RNA expression of many other genes, with 6,832 significant associations in total. COAD shows the largest number of these associations.

The most reproducible CDS1-associated genes across cancer lineages are CEP128, TPPP3, and PARP15. Each is linked with CDS1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CDS1-to-partner and partner-to-CDS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDS1 versus CEP128 in UCEC, with a Pearson correlation of -0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDS1→partner) and Y-score (partner→CDS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCEP128 →-0.586-0.452.001.00434
OVTPPP3 →+1.214+0.487.007.00534
OVPARP15 →-0.554-0.442.007.00534
GBMNWD1 →+1.278+0.695<.001.00134
UCECTBX19 →-0.742-0.696.001<.00134
COADFMNL1 →-0.670-0.385.001.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,832 associations by consensus.

CDS1 vs CEP128 — UCEC

Per-sample scatter of CDS1 vs CEP128 in UCEC (Pearson r = -0.34).

Explore this scatter interactively →

Exploration