CDR1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDR1 mutation is significantly associated with the RNA expression of many other genes, with 4,137 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDR1-associated genes across cancer lineages are RNU4-58P, MRPS30, and INCENP. Each is linked with CDR1 in more than 2 cancer types. Because this analysis shows association rather than direction, both CDR1-to-partner and partner-to-CDR1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDR1→partner) and Y-score (partner→CDR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADRNU4-58P →+0.236+3.434.006.00633
UCECMRPS30 →+0.356+3.849.003<.00133
UCECINCENP →+0.617+2.938.001<.00133
UCECPRKCZ →+0.511+2.491<.001<.00133
UCECPOLR2E →+0.612+3.584<.001<.00133
BRCARNA5SP414 →+0.216+8.471<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,137 associations by consensus.

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