CDO1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDO1 mutation is significantly associated with the RNA expression of many other genes, with 2,942 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDO1-associated genes across cancer lineages are MIR615, FAM177A1, and SLC25A4. Each is linked with CDO1 in more than 2 cancer types. Because this analysis shows association rather than direction, both CDO1-to-partner and partner-to-CDO1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR615 grouped by CDO1-low versus CDO1-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDO1→partner) and Y-score (partner→CDO1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAMIR615 →+0.800+5.411<.001.00533
UCECFAM177A1 →+0.370+3.016<.001<.00132
UCECSLC25A4 →+0.402+2.010.006.00532
UCECDPEP1 →-0.929-1.991.009.00932
UCECSKA1 →+0.805+2.595<.001<.00132
UCECPEF1 →+0.268+2.971.005<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,942 associations by consensus.

MIR615 by CDO1 expression — BLCA

Box plot of MIR615 in CDO1-low vs CDO1-high samples in BLCA.

Explore this box plot interactively →

Exploration