CDKN1C

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDKN1C protein abundance is significantly associated with the RNA expression of many other genes, with 4,382 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible CDKN1C-associated genes across cancer lineages are FXYD6, TMCC2, and ATOH8. Each is linked with CDKN1C in more than 3 cancer types. Because this analysis shows association rather than direction, both CDKN1C-to-partner and partner-to-CDKN1C results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDKN1C versus FXYD6 in OV, with a Pearson correlation of 0.41.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDKN1C→partner) and Y-score (partner→CDKN1C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVFXYD6 →+0.916+0.776.008.00334
GBMTMCC2 →+0.828+0.408<.001.00133
UCECATOH8 →+0.953+0.481<.001<.00133
UCECPURG →+0.764+0.331<.001.00233
OVCCDC184 →+0.538+0.610.008.00633
HNSCZNF594 →+0.870+0.660.005.00533
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,382 associations by consensus.

CDKN1C vs FXYD6 — OV

Per-sample scatter of CDKN1C vs FXYD6 in OV (Pearson r = 0.41).

Explore this scatter interactively →

Exploration