CDKN1B

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDKN1B mutation is significantly associated with the total protein of many other genes, with 27 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDKN1B-associated genes across cancer lineages are p62 Lck ligand, EGFR_pY1068, and ERK2. Each is linked with CDKN1B in more than 1 cancer types. Because this analysis shows association rather than direction, both CDKN1B-to-partner and partner-to-CDKN1B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p62 Lck ligand grouped by CDKN1B-low versus CDKN1B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDKN1B→partner) and Y-score (partner→CDKN1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp62 Lck ligand →+0.422+3.469.002.00232
UCECEGFR_pY1068 →-0.242-3.169.027.01931
UCECERK2 →+0.218+3.169.009.01831
UCECFoxM1 →+0.307+2.469.006.01031
UCECGATA6 →-0.148-2.577.039.01131
UCECINPP4B →-0.304-2.321.031.03331
Each partner links to its Q-omics profile. Showing the 6 strongest of 27 associations by consensus.

p62 Lck ligand by CDKN1B expression — UCEC

Box plot of p62 Lck ligand in CDKN1B-low vs CDKN1B-high samples in UCEC.

Explore this box plot interactively →

Exploration