CDK16

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDK16 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,847 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CDK16-associated proteins across cancer lineages are HMGB3, MCM7, and ECT2_T359. Each is linked with CDK16 in more than 7 cancer types. Because this analysis shows association rather than direction, both CDK16-to-partner and partner-to-CDK16 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDK16 versus HMGB3 in LUAD, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CDK16→partner) and Y-score (partner→CDK16) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADHMGB3 →+0.905+0.505<.001<.00138
GBMMCM7 →+0.647+0.577.001<.00138
PDACECT2_T359 →+0.987+0.435<.001<.00137
GBMKIF11 →+0.696+0.516<.001<.00137
LSCCMCM2 →+0.610+0.626<.001<.00137
GBMMCM3 →+0.628+0.467<.001.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,847 associations by consensus.

CDK16 vs HMGB3 — LUAD

Per-sample scatter of CDK16 vs HMGB3 in LUAD (Pearson r = 0.39).

Explore this scatter interactively →

Exploration