CDH9

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDH9 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,193 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CDH9-associated proteins across cancer lineages are MAPT, MBD4, and MBLAC2. Each is linked with CDH9 in more than 2 cancer types. Because this analysis shows association rather than direction, both CDH9-to-partner and partner-to-CDH9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDH9 versus MAPT in CCRCC, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CDH9→partner) and Y-score (partner→CDH9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCMAPT →+0.481+0.703.007.00332
CCRCCMBD4 →-0.523-0.993<.001<.00132
GBMMBLAC2 →+0.554+1.080<.001<.00132
GBMMPRIP_S891 →+0.621+1.153<.001<.00132
CCRCCMSR1_S27 →-0.684-1.532.009.00132
GBMMTURN →+0.698+0.874<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,193 associations by consensus.

CDH9 vs MAPT — CCRCC

Per-sample scatter of CDH9 vs MAPT in CCRCC (Pearson r = 0.31).

Explore this scatter interactively →

Exploration