CDH3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDH3 mutation is significantly associated with the total protein of many other genes, with 25 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDH3-associated genes across cancer lineages are eIF4E, MSH6, and GSK3-a-b. Each is linked with CDH3 in more than 1 cancer types. Because this analysis shows association rather than direction, both CDH3-to-partner and partner-to-CDH3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by CDH3-low versus CDH3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDH3→partner) and Y-score (partner→CDH3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.189+2.662.017<.00132
UCECMSH6 →-0.469-3.584<.001.00232
BLCAGSK3-a-b →+0.195+3.000.021.03631
UCEC14-3-3_beta →-0.107-3.432.004.00531
UCECG6PD →-0.309-2.979.010<.00131
UCECINPP4B →-0.272-2.584.024.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

eIF4E by CDH3 expression — UCEC

Box plot of eIF4E in CDH3-low vs CDH3-high samples in UCEC.

Explore this box plot interactively →

Exploration