CDH24

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDH24 RNA expression is significantly associated with the protein abundance of many other proteins, with 18,434 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CDH24-associated proteins across cancer lineages are SUPT16H, MCM3, and MCM4. Each is linked with CDH24 in more than 7 cancer types. Because this analysis shows association rather than direction, both CDH24-to-partner and partner-to-CDH24 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDH24 versus SUPT16H in LSCC, with a Pearson correlation of 0.54.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CDH24→partner) and Y-score (partner→CDH24) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSUPT16H →+0.464+0.682<.001<.00138
LSCCMCM3 →+0.657+0.614<.001<.00137
LSCCMCM4 →+0.651+0.655<.001<.00137
GBMSOX4_S354 →+0.841+0.745<.001<.00136
LSCCSSRP1_S444 →+0.384+0.702<.001<.00136
LUADSTMN1 →+0.605+1.095<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,434 associations by consensus.

CDH24 vs SUPT16H — LSCC

Per-sample scatter of CDH24 vs SUPT16H in LSCC (Pearson r = 0.54).

Explore this scatter interactively →

Exploration