CDH10

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDH10 protein abundance is significantly associated with the RNA expression of many other genes, with 2,976 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CDH10-associated genes across cancer lineages are KCNJ4, PITPNA, and ATG12P2. Each is linked with CDH10 in more than 1 cancer types. Because this analysis shows association rather than direction, both CDH10-to-partner and partner-to-CDH10 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDH10 versus KCNJ4 in GBM, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDH10→partner) and Y-score (partner→CDH10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMKCNJ4 →+1.284+0.551<.001<.00132
OVPITPNA →+1.445+1.480.002.00132
OVATG12P2 →+0.652+1.139.001.00132
OVLINC02091 →+0.813+1.008.009.00932
OVCOMMD9 →-1.145-1.064.001.00131
OVCLK4 →+0.823+1.719.005.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,976 associations by consensus.

CDH10 vs KCNJ4 — GBM

Per-sample scatter of CDH10 vs KCNJ4 in GBM (Pearson r = 0.39).

Explore this scatter interactively →

Exploration