CDCA8

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDCA8 mutation is significantly associated with the RNA expression of many other genes, with 1,134 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDCA8-associated genes across cancer lineages are PGBD4P6, RN7SKP107, and MIR549A. Each is linked with CDCA8 in more than 2 cancer types. Because this analysis shows association rather than direction, both CDCA8-to-partner and partner-to-CDCA8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PGBD4P6 grouped by CDCA8-low versus CDCA8-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDCA8→partner) and Y-score (partner→CDCA8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCPGBD4P6 →+0.198+6.593<.001<.00133
LUSCRN7SKP107 →+0.357+5.578<.001.00232
LUSCMIR549A →+0.700+4.625<.001.00832
LUSCRNA5SP86 →+0.877+6.593<.001<.00132
LUSCMIR1202 →+0.613+6.327<.001<.00132
LUSCRN7SKP263 →+0.624+5.309<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,134 associations by consensus.

PGBD4P6 by CDCA8 expression — LUSC

Box plot of PGBD4P6 in CDCA8-low vs CDCA8-high samples in LUSC.

Explore this box plot interactively →

Exploration