CDC25C

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDC25C mutation is significantly associated with the RNA expression of many other genes, with 1,791 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDC25C-associated genes across cancer lineages are RNU6-33P, CASTOR2, and MIR7702. Each is linked with CDC25C in more than 2 cancer types. Because this analysis shows association rather than direction, both CDC25C-to-partner and partner-to-CDC25C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-33P grouped by CDC25C-low versus CDC25C-high in READ.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDC25C→partner) and Y-score (partner→CDC25C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
READRNU6-33P →+0.492+3.965.007.00633
UCECCASTOR2 →+0.670+2.202.002.00132
UCECMIR7702 →+0.163+3.738<.001.00932
READRNU4-80P →+0.599+3.827<.001.00632
READCSH2 →+0.020+4.341<.001.00732
BRCAATP6V0E1P3 →+0.671+4.082<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,791 associations by consensus.

RNU6-33P by CDC25C expression — READ

Box plot of RNU6-33P in CDC25C-low vs CDC25C-high samples in READ.

Explore this box plot interactively →

Exploration