CD27-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CD27-AS1 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of CD27-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where CD27-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types CD27-AS1 is over-expressed in tumor, although a few such as UCEC and BLCA show the opposite, repressed pattern.

KIRC, KIRP, and LIHC are the cancer types where CD27-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CD27-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCAllIV+0.751<.00112view →
KIRPFemaleAll+1.053<.00111view →
LIHCAllII,III,IV+0.702<.0019view →
HNSCMaleIII,IV+0.839<.0018view →
UCECAllAll−1.637<.0016view →
CHOLAllAll+2.205<.0015view →
COADAllAll+0.375.0024view →
BLCAAllIV−0.921.0073view →
LUSCAllAll+0.386.0023view →
LUSCAllIII,IV−0.859.0132view →
PRADAllAll−0.337.0012view →
ESCAFemaleAll+0.563.0171view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 11 lineages.

Exploration