CCSER1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CCSER1 RNA differs between tumor and matched normal tissue in 13 of 18 cancer types tested, making tumor–normal expression one of CCSER1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where CCSER1 RNA is repressed in tumor relative to normal tissue. In most cancer types CCSER1 is over-expressed in tumor, although a few such as KIRC and KIRP show the opposite, repressed pattern.

KIRC, KIRP, and THCA are the cancer types where CCSER1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CCSER1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCFemaleIV−1.476<.00112view →
KIRPMaleAll−1.259<.00111view →
THCAFemaleII,III,IV−0.848<.00111view →
KICHFemaleAll−1.365<.00110view →
LUADMaleAll+0.784<.0018view →
COADMaleAll+0.462.0015view →
STADAllII,III,IV+0.337.0174view →
BRCAFemaleAll−0.246.0054view →
LUSCAllAll+0.388<.0013view →
PAADMaleAll+0.804.0012view →
CHOLAllAll+0.714.0062view →
PRADAllAll+0.399<.0012view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 13 lineages.

Exploration