CCNYL4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCNYL4 mutation is significantly associated with the RNA expression of many other genes, with 78 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCNYL4-associated genes across cancer lineages are PAICSP7, RPL23AP88, and RN7SL840P. Each is linked with CCNYL4 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCNYL4-to-partner and partner-to-CCNYL4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCNYL4→partner) and Y-score (partner→CCNYL4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPAICSP7 →+0.085+3.186.008.00832
UCECRPL23AP88 →+0.190+2.847.008.00431
UCECRN7SL840P →+0.469+2.776<.001.00531
UCECRBAK-RBAKDN →+0.123+2.990<.001.00631
UCECF8A2 →+0.030+3.694.001.00331
UCECMIR8082 →+0.471+3.239<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 78 associations by consensus.

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