CCNT1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCNT1 protein abundance is significantly associated with the RNA expression of many other genes, with 15,410 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CCNT1-associated genes across cancer lineages are KANSL2, COPZ1, and COX6A1. Each is linked with CCNT1 in more than 6 cancer types. Because this analysis shows association rather than direction, both CCNT1-to-partner and partner-to-CCNT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCNT1 versus KANSL2 in OV, with a Pearson correlation of 0.51.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCNT1→partner) and Y-score (partner→CCNT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVKANSL2 →+0.612+0.472<.001<.00137
HNSCCOPZ1 →+0.567+0.212.005.00636
HNSCCOX6A1 →+0.694+0.250.001<.00136
LSCCTROAP →+0.935+0.362<.001<.00136
UCECESPL1 →+0.940+0.215<.001<.00136
HNSCPOLR3K →+0.585+0.254.002<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,410 associations by consensus.

CCNT1 vs KANSL2 — OV

Per-sample scatter of CCNT1 vs KANSL2 in OV (Pearson r = 0.51).

Explore this scatter interactively →

Exploration