CCNK

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCNK mutation is significantly associated with the mutation status of many other genes, with 3,314 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CCNK-associated genes across cancer lineages are MOSPD3, TARDBP, and SPOP. Each is linked with CCNK in more than 2 cancer types. Because this analysis shows association rather than direction, both CCNK-to-partner and partner-to-CCNK results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MOSPD3 grouped by CCNK-low versus CCNK-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCNK→partner) and Y-score (partner→CCNK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaMOSPD3 →+5.584+5.014.003.00313
BLOOD_LymphomaTARDBP →+5.584+5.014.003.00313
BLOOD_LymphomaSPOP →+4.584+4.584.007.00713
BLOOD_LymphomaDOCK4 →+4.169+5.316<.001<.00113
BLOOD_LymphomaCDK8 →+5.584+5.014.003.00313
UPPER_AERODIGESTIVE_TRACTTPP2 →+4.954+4.392.008.00813
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,314 associations by consensus.

MOSPD3 by CCNK expression — BLOOD_Lymphoma

Box plot of MOSPD3 in CCNK-low vs CCNK-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration