CCM2L

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCM2L protein abundance is significantly associated with the RNA expression of many other genes, with 9,054 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CCM2L-associated genes across cancer lineages are FLT1, IKBKB, and TEK. Each is linked with CCM2L in more than 1 cancer types. Because this analysis shows association rather than direction, both CCM2L-to-partner and partner-to-CCM2L results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCM2L versus FLT1 in LSCC, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCM2L→partner) and Y-score (partner→CCM2L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCFLT1 →+0.524+0.389.002.00832
LUADIKBKB →-0.655-0.532.004.00932
LUADTEK →+0.864+0.700<.001<.00132
LUADLYVE1 →+1.269+0.745<.001<.00132
LUADFAM107A →+1.217+0.539.007.00732
LUADCCDC134 →-0.320-0.550.007.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,054 associations by consensus.

CCM2L vs FLT1 — LSCC

Per-sample scatter of CCM2L vs FLT1 in LSCC (Pearson r = 0.42).

Explore this scatter interactively →

Exploration