CCL20

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CCL20 RNA differs between tumor and matched normal tissue in 13 of 18 cancer types tested, making tumor–normal expression one of CCL20’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where CCL20 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types CCL20 is over-expressed in tumor, although a few such as KICH show the opposite, repressed pattern.

THCA, COAD, and KIRC are the cancer types where CCL20 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CCL20 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAMaleAll+1.804<.00111view →
COADAllIII,IV+1.686<.00110view →
KIRCMaleAll+2.808<.0019view →
LIHCAllIII,IV+3.228<.0018view →
HNSCAllAll+1.225.0027view →
LUADFemaleII,III,IV+2.815<.0015view →
KICHFemaleAll−1.955<.0015view →
STADAllAll+1.846.0044view →
BRCAAllAll+0.631<.0014view →
CHOLMaleAll+4.195<.0012view →
UCECAllAll+1.128.0332view →
ESCAAllAll+3.306.0191view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 13 lineages.

CCL20–THCA

Tumor-vs-normal expression box plot for CCL20 RNA in THCA.

Open the THCA breakdown →

Exploration