CCKAR

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCKAR mutation is significantly associated with the total protein of many other genes, with 32 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCKAR-associated genes across cancer lineages are EGFR, Caspase-7-cleavedD198, and p38-MAPK_pT180_Y182. Each is linked with CCKAR in more than 1 cancer types. Because this analysis shows association rather than direction, both CCKAR-to-partner and partner-to-CCKAR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR grouped by CCKAR-low versus CCKAR-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCKAR→partner) and Y-score (partner→CCKAR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR →-0.213-2.558<.001.01032
UCECCaspase-7-cleavedD198 →+0.430+1.604.040.04132
SKCMp38-MAPK_pT180_Y182 →-0.317-1.906.023.01632
SKCMRab11 →-0.171-2.459.035.01832
LUADp70-S6K →+0.242+3.169.022.01831
UCEC14-3-3_beta →-0.090-2.432.011.01831
Each partner links to its Q-omics profile. Showing the 6 strongest of 32 associations by consensus.

EGFR by CCKAR expression — UCEC

Box plot of EGFR in CCKAR-low vs CCKAR-high samples in UCEC.

Explore this box plot interactively →

Exploration