CCDC97

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC97 protein abundance is significantly associated with the RNA expression of many other genes, with 13,164 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CCDC97-associated genes across cancer lineages are TIMM50, FBL, and CCDC150. Each is linked with CCDC97 in more than 5 cancer types. Because this analysis shows association rather than direction, both CCDC97-to-partner and partner-to-CCDC97 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC97 versus TIMM50 in BRCA, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC97→partner) and Y-score (partner→CCDC97) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCATIMM50 →+0.510+0.281<.001<.00136
HNSCFBL →+0.909+0.208<.001<.00136
UCECCCDC150 →+0.623+0.199<.001<.00136
HNSCRFC4 →+0.807+0.174.009.00336
BRCARAB31 →-0.906-0.225<.001<.00135
UCECZNF45 →+0.604+0.262.002<.00126
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,164 associations by consensus.

CCDC97 vs TIMM50 — BRCA

Per-sample scatter of CCDC97 vs TIMM50 in BRCA (Pearson r = 0.33).

Explore this scatter interactively →

Exploration