CCDC88C

Across TCGA cell cohorts, CCDC88C RNA expression is significantly associated with the RNA expression of many other genes, with 12,963 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CCDC88C-associated genes across cancer lineages are PPP4R3A, YLPM1, and STRBP. Each is linked with CCDC88C in more than 11 cancer types. Because this analysis shows association rather than direction, both CCDC88C-to-partner and partner-to-CCDC88C results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC88C versus PPP4R3A in OESOPHAGUS, with a Pearson correlation of 0.63.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC88C→partner) and Y-score (partner→CCDC88C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OESOPHAGUS	PPP4R3A →	+0.947	+1.520	.001	<.001	3	11
KIDNEY	YLPM1 →	+1.337	+1.504	<.001	<.001	3	11
BONE	STRBP →	+1.792	+2.216	<.001	<.001	3	11
UPPER_AERODIGESTIVE_TRACT	L2HGDH →	+1.159	+1.821	<.001	<.001	2	12
BONE	TFAP4 →	+2.107	+3.032	<.001	<.001	3	11
OESOPHAGUS	DICER1 →	+1.349	+1.577	.001	<.001	2	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,963 associations by consensus.

CCDC88C vs PPP4R3A — OESOPHAGUS

Explore this scatter interactively →