CCDC88C

Across TCGA cell cohorts, CCDC88C RNA expression is significantly associated with the go_rna of many other GO terms, with 5,635 significant associations in total. BONE shows the largest number of these associations.

The most reproducible CCDC88C-associated GO terms across cancer lineages are Extracellular matrix organization, Extracellular structure organization, and External encapsulating structure organization. Each is linked with CCDC88C in more than 12 cancer types. Because this analysis shows association rather than direction, both CCDC88C-to-partner and partner-to-CCDC88C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Extracellular matrix organization grouped by CCDC88C-low versus CCDC88C-high in LIVER.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC88C→partner) and Y-score (partner→CCDC88C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIVER	Extracellular matrix organization →	-0.185	-1.838	<.001	<.001	3	13
LIVER	Extracellular structure organization →	-0.185	-1.784	<.001	<.001	3	13
LIVER	External encapsulating structure organization →	-0.183	-1.838	<.001	<.001	3	13
BONE	Epigenetic regulation of gene expression →	+0.084	+2.168	.005	.002	3	12
SOFT_TISSUE	Regulation of collagen metabolic process →	-0.130	-0.873	.001	.008	3	11
BONE	Regulation of proteolysis →	-0.117	-2.184	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,635 associations by consensus.

Extracellular matrix organization by CCDC88C expression — LIVER

Explore this box plot interactively →