CCDC88B

Across TCGA patient cohorts, CCDC88B protein abundance is significantly associated with the RNA expression of many other genes, with 18,997 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CCDC88B-associated genes across cancer lineages are CYTH4, NCF4, and CSF2RB. Each is linked with CCDC88B in more than 9 cancer types. Because this analysis shows association rather than direction, both CCDC88B-to-partner and partner-to-CCDC88B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC88B versus CYTH4 in GBM, with a Pearson correlation of 0.78.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC88B→partner) and Y-score (partner→CCDC88B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	CYTH4 →	+1.078	+0.483	<.001	<.001	3	10
GBM	NCF4 →	+1.247	+0.536	<.001	<.001	3	10
COAD	CSF2RB →	+1.221	+0.758	<.001	<.001	3	10
HNSC	BIN2 →	+1.263	+0.464	<.001	<.001	3	10
UCEC	VNN2 →	+1.340	+0.555	<.001	<.001	3	10
GBM	PLEK →	+1.264	+0.494	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 18,997 associations by consensus.

CCDC88B vs CYTH4 — GBM

Explore this scatter interactively →