CCDC87

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC87 mutation is significantly associated with the RNA expression of many other genes, with 3,717 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC87-associated genes across cancer lineages are OR4C1P, MED15P1, and HSPA8. Each is linked with CCDC87 in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC87-to-partner and partner-to-CCDC87 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR4C1P grouped by CCDC87-low versus CCDC87-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC87→partner) and Y-score (partner→CCDC87) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCOR4C1P →+0.104+4.063.002.00433
HNSCMED15P1 →+0.053+5.020<.001<.00133
UCECHSPA8 →+0.977+2.971<.001<.00133
COADC18orf25 →+0.554+3.229.001.00933
COADSKA1 →+0.890+3.196<.001.00933
COADNDC80 →+0.713+3.210.003.00933
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,717 associations by consensus.

OR4C1P by CCDC87 expression — HNSC

Box plot of OR4C1P in CCDC87-low vs CCDC87-high samples in HNSC.

Explore this box plot interactively →

Exploration