Across TCGA patient cohorts, CCDC60 mutation is significantly associated with the RNA expression of many other genes, with 1,137 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC60-associated genes across cancer lineages are LINC01072, PCNAP3, and RNU6-932P. Each is linked with CCDC60 in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC60-to-partner and partner-to-CCDC60 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC60→partner) and Y-score (partner→CCDC60) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CESC	LINC01072 →	+0.118	+3.345	<.001	.008	3	3
BRCA	PCNAP3 →	+0.073	+4.340	.003	<.001	3	3
UCEC	RNU6-932P →	+0.435	+1.719	<.001	.006	3	3
GBM	MTND5P41 →	+0.166	+5.624	<.001	<.001	3	2
GBM	MTL3P →	+0.367	+4.321	<.001	.002	3	2
BRCA	PISRT1 →	+0.034	+4.183	.001	.008	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,137 associations by consensus.

Exploration

CCDC60 survival (RNA) · tumor vs normal (RNA) · all CCDC60 data types